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Saturday, July 11, 2009

Dinosaur soft tissue and protein—even more confirmation!



Some of you may remember some time ago, around 1991, an Evolutionist (Dr. Mary Schweitzer) found red blood cells in a fossil of a T-Rex dinosaur. I think most will find Dr Schweitzer's 2005 findings fascinating. Logically speaking, what should one conclude if they find red blood cells and elastic bone marrow? One thing I wouldn't be wondering is, how is it possible that these blood cells could have survived for 63-65 million years? But rather, I would ask, is it possible that maybe these fossils are not millions of years old? This, in my opinion, and many others is where the evolution theory is a hindrance to real science. When the evolution goggles are on it's difficult to be open minded and to contemplate the possibility that millions of years might be unreasonable when finding red blood cells in Dino fossils. Their presuppositions prevent them from this possibility.





Here's the article from CMI:



Dinosaur soft tissue and protein—even more confirmation!

Mary Schweitzer announces even stronger evidence, this time from a duckbilled dino fossil, of even more proteins—and the same amazingly preserved vessel and cell structures as before.
by Carl Wieland

Published: 6 May 2009 (GMT+10)

Creationists were fascinated, and evolutionists mostly skeptical, when evolutionist Dr Mary Schweitzer claimed in the 1990s that an unfossilized piece of T. rex bone contained red blood cells. Further, that there was immunological and spectroscopic evidence of the presence of hemoglobin, the oxygen-carrying protein that gives red blood cells their colour.1

Then in 2005, Schweitzer announced a further sensational discovery in a different T.rex bone. After the mineral matrix was dissolved,2 what remained were structures with all the appearance of soft tissue, still soft and stretchy. Some of these appeared to be transparent branching blood vessels, with a substance inside them containing further structures looking just like nucleated red blood cells, and able to be squeezed out of the vessels like toothpaste.

How could such fragile structures survive for millions of years? Long-agers went into intense, but not very effective damage control, such as seen in the item (containing CMI’s response) Squirming at the Squishosaur.

Gradually, further evidence strengthened the case that Schweitzer had indeed discovered evidence of astonishing preservation of organic material in fossils. In 2007, in Squashing Squishosaur Scepticism, we reported that she and her team had performed careful tests to establish the presence of the protein collagen in the dino fossil—an important protein in bone. They were even able to sequence stretches of it, which showed that it was 58% similar to collagen from a chicken, and 51% similar to that from a frog.3

It has been pointed out many times that fragile, complex molecules like proteins, even if hermetically sealed, should fall apart all by themselves from thermodynamic considerations alone in well under the 65 million years that evolutionists insist have passed since Schweitzer’s T. rex specimen was entombed.4,5 Furthermore, bones of an Iguanodon allegedly twice as old (“dated” to 120 Ma) contained enough of the protein osteocalcin to produce an immune reaction.6

Many anti-creationists therefore breathed a sigh of relief when in mid-2008 a paper claimed to have found evidence that the transparent blood vessels, for instance, were the result of recent bacterial formation of biofilms, forming “endocasts” that followed the shape of where the original vessels lay, and that the red blood cells are actually iron-rich spheres called framboids. There were substantial reasons why not just creationists, but Schweitzer and other non-creationists were not at all convinced by these claims—see Doubting doubts about the Squishosaur.

The new findings

Now comes a further announcement by Schweitzer and others, in the prestigious journal Science, of substantial additional evidence to bolster her previous findings.7 The specimen on this occasion was a piece of fossil hadrosaur (duckbilled dinosaur) bone (Brachylophosaurus canadensis) regarded by evolutionary assumptions as being 80 million years old.
In short, the researchers found evidence of “the same fibrous matrix, transparent, flexible vessels, and preserved microstructures she had seen in the T. rex sample”.8 Only this time they went to exceptional lengths to silence critics.

Critics said that her claims, which given the millions of years perspective are indeed “extraordinary”, required extraordinary evidence. But this is a clichĂ©; in reality, they just require evidence, and that has been amply provided. Yet the critics demanded additional protein sequencing, super-careful handling to avoid claims of contamination, and confirmation from other laboratories. So Schweitzer and her team set about doing just that when they looked at the leg bone of this hadrosaur encased in sandstone.

Extraordinary measures were taken to keep the sample away from contamination until it reached the lab. They used an even more sophisticated and newer mass spectrometer, and sent the samples to two other labs for confirmation. They reported finding not just collagen, but evidence of two additional proteins—elastin and laminin. They also found structures uncannily resembling the cells found in both blood and bone, as well as cellular basement membrane matrix. And there were, once again, hints of hemoglobin, gleaned from applying hemoglobin-specific antibodies to the structures and seeing if the antibodies would bind to them.
Some scientists are still skeptical about the hemoglobin, which is “difficult to identify with current technology”. Dr Pavel Pevzner of the University of California, was quoted as saying that if it is not a contaminant, it would be “much bigger news [than the confirmed discoveries of blood vessels and other connective tissues in] this paper.”9

Even leaving aside the hemoglobin, the Schweitzer et al paper is huge news. Pevzner had been critical of the technique used in Schweitzer’s analysis of the T. rex protein, but now he says that her new study “was ‘done the right way,’ with more stringent controls to guard against contamination”, for one thing.

There were eight collagen proteins alone discovered from the hadrosaur fossil, which revealed twice as many amino acids as the previous tyrannosaur specimen. These were compared with sequences from animals living today as well as from mastodon fossils and her T. rex sequences. The hadrosaur and tyrannosaur collagens were closer to each other than the others, and each were closer to chickens and ostriches than to crocodilians, for instance—results which would also confirm her previous identification of T. rex collagen.

The samples were identified as collagen by both sophisticated mass spectroscopy and antibody-binding techniques. They were also examined via both light and electron microscopy, which confirmed that they had the appearance of collagen as well.
As Schweitzer says, “These data not only build upon what we got from the T. rex, they take the research even further.”

Power of the paradigm

Philosophers of science have written much about the power of a paradigm, especially when it has worldview implications, such as long-age belief. Such a paradigm is seldom, if ever, overthrown simply because of observations that contradict its expectations. Even Schweitzer herself, despite professing to be an evangelical Christian, is extremely defensive about the old-age paradigm—see Schweitzer’s Dangerous Discovery.

What happens is that “auxiliary” hypotheses and assumptions are constructed to preserve the intactness of the “core” hypothesis, in this case what is known as “deep time” (see further explanation). In simple terms, proteins should simply not have been able to last for these tens of millions of years. So when they are found in specimens dated this old, the paradigm is under serious threat.

The most straightforward fit to the evidence is that the time of burial of these dinosaurs was not millions of years ago at all, but only thousands of years ago at most. As the evidence continues to mount that dinosaur fossils do indeed contain well-preserved soft tissue structures and identifiable proteins, the assumption that will increasingly be made is that “we now know that such tissue components can last that long, after all.”

Not many will see this as the paradigm-rescuing assumption that it is. Consider the line of reasoning:

1). We know that this dinosaur fossil is 80 million years old.

2). Calculations based on operational (observational) science indicate that no collagen should survive anywhere near that long.

3). Collagen has been identified in these dinosaur fossils. Therefore:

4). There must be a mistaken assumption in the calculations mentioned in Point 2)—though we don’t know for sure how, collagen must be able to survive for 80 million years. How do we know that? Because

5). We know that this dinosaur fossil is 80 million years old.
Notice how points 1) and 5) are identical, revealing the circularity. The following chain of reasoning is far more science-based:

1). This dinosaur fossil is claimed to be 80 million years old.

2). Calculations based on operational (observational) science indicate that no collagen should survive anywhere near that long.

3). Collagen has been identified in these dinosaur fossils. Therefore:

4). The claim in point 1) is wrong. The fossil cannot be anywhere near that old. This matches the expectations of a worldview based on the history given to us in the book of Genesis.
We hope that many readers will be able to use this sort of evidence to gently pry open many closed minds.

Update 9 May 2009: see answer to a critic who disputes that these findings are a big deal.

9 comments:

highdesert said...

What the AiG writer ignores is the difference in the strength of evidence for the age of the rocks vs. the evidence for stability of the collagen molecule after 80 million years.

(And I have no respect for AiG.)

It will be interesting to see what happens over the next five or ten years with other old bones.

Joe Sirianni said...

Well then you should really really look into the method of dating those rocks. The Geologic column is the invention of man, it doesn't exist. Evolutionist continue to use circular reasoning in that the rocks date the bones and the bones date the rocks. While I respect your opinion I wonder if your presupposition (80 million years old) is getting in the way. Do you think Blood cells can survive that long? No scientist with logic and reasoning would believe that. But I guess your right, we'll see what future evidences bring to light in years to come with this research. Though I wonder if evolutionist will push it aside no matter what it shows or where it leads them.

Thanks for your comment. I really appreciate it. Also what is it about AIG that you have no respect for? The bible says that all liars will have their part in the lake of fire. AIG is not aiming to "lie" to people.

Joe

highdesert said...

ironic given your presupposition that everything must agree with an ancient nonscientific text full of folk tales and myths

Joe Sirianni said...

Sorry that's not true - our supposition is that we "start" with the bible as literal history and God's account of His creation. You start with "millions of years is true" despite the multiple evidences presented for a young earth and young fossils. Now it just so happens that modern science falls in line with what scripture has said all along on certain things. That's just the Wisdom of God. Like when the bible, in the book of Job it stated that the earth was a sphere and hangs on nothing. But scientist only discovered this a few hundred years ago. Or how the book of Solomon mentioned the hydraulic cycle and wind currents etc. And countless times scoffers attempted to discredit the bible but modern archeological discoveries began to confirm what it said. The bible has always been a trustworthy collection of books given by divine revelation from God to man.

highdesert said...

I think we already had this discussion...I thought it was 'circle', not sphere.

I don't respect AiG, Hovind etc because they lead people to believe the things you put in your comment.
I am not sure why they don't fear the Lake of Firew but I would guess it is because (1) they are Saved already, or can get forgiven every time, (2) they think it's okay to lie in the cause of supporting the Bible, and/or (3) they try to skirt actual lying, using tactics like strawman arguments, innuendo, quotemining (which I think is lying but mnaybe they think it is just blurring the truth) etc.

highdesert said...

You might be interested in watching this Youtube video series:
Ray Comfort in a discussion with Thunderf00t, the person who makes the 'Why People Laugh at Creationists' Youtube videos. It has 9+ parts to it.
IMO Ray Comfort comes off as someone who isn't much of a thinker; he just keeps going to the same talking points that I've heard on some of his videos. Actually I think he's a bit weird. But your reaction might be different.

http://www.youtube.com/watch?v=N2FskTKrx40&feature=channel

Christian Darwinist said...

It's your friendly neighborhood Christian Darwinist against jumping in late to the argument.

I've done some research into this soft tissue find. It's intriguing.

Dr Schweitzer, the discoverer of this soft tissue ardently insists that she is a Christian. But like myself, she has been fully persuaded of the truth of evolution.

But when creationists misrepresent Schweitzer’s data, she takes it personally: she describes herself as “a complete and total Christian.” On a shelf in her office is a plaque bearing an Old Testament verse: “For I know the plans I have for you,” declares the Lord, “plans to prosper you and not to harm you, plans to give you hope and a future.” Link

On page 3, the article continues...

Geologists have established that the Hell Creek Formation, where B. rex was found, is 68 million years old, and so are the bones buried in it. She’s horrified that some Christians accuse her of hiding the true meaning of her data. “They treat you really bad,” she says. “They twist your words and they manipulate your data.” For her, science and religion represent two different ways of looking at the world; invoking the hand of God to explain natural phenomena breaks the rules of science. After all, she says, what God asks is faith, not evidence. “If you have all this evidence and proof positive that God exists, you don’t need faith. I think he kind of designed it so that we’d never be able to prove his existence. And I think that’s really cool.” Link

In another article, some evidence has come out that is rather inconvenient for Creationists.

When the scientists compared the protein sequence pattern to those of living animals in a database, it was found to be structurally similar to chicken collagen, and there were also similarities with frog and newt protein.
Dr Schweitzer said the similarity to chickens was exactly what one would expect given the relationship between modern birds and dinosaurs."


Gosh, I hardly know what I can say to you, Blog Author. I think I understand where you're coming from. You'd rather believe God's Word than all the research in the world. As it says in Romans, "Let God be true and every man a liar." However, for myself, I have been really moved by the enormous amount of compelling evidence for evolution. It all fits together with what is observable today in nature. This is not some hoax. These are earnest men and women who are striving to get to the truth of the matter, and this theory fits the evidence exquisitely! By my best efforts to understand it, creationism doesn't fit the evidence. It's a circular peg for a square hole.

Accepting the theory of evolution has challenged my faith. Absolutely! However, my confidence in God's existence--and in the crucifixion and resurrection of Christ--couldn't be stronger.

Joe Sirianni said...

Christian Darwinist:

Thanks for your comments.

However, once again, your position as a Christian who try's to incorporate Evolution is irreconcilable with scripture. Believe me; if the two were compatible I would be more than happy to believe that. The problem is that the two completely contradict each other. For your position to be true you have to throughout much scripture and by the take of it and previous comments/posts etc. It seems as though you are ignoring them along with other proofs of a young earth. Maybe you can find time to listen to these short videos? The video is choppy but the audio is fine.

"Astounding Evidence for a young earth" 1-5

http://www.youtube.com/watch?v=T25UXRfmv6M

http://www.youtube.com/watch?v=1Ml42P_xVkE

http://www.youtube.com/watch?v=ArAzv97wvdM

http://www.youtube.com/watch?v=YmFJY_NrSAw

http://www.youtube.com/watch?v=xzM7eBo0Uu4

Joe Sirianni said...

Highdesert

"Ray Comfort comes off as someone who isn't much of a thinker"

Thunderfoots answer to Ray Comfort was a consistent "it's an unknown" Doesn’t sound like a thinker to me, nevertheless opened minded.

Maybe Ray comes off as "not a thinker" because he chooses to use “simple” logic.

You know when he says "how do you know someone built that building?" You have never seen him/her before. So how do you know that a builder built that building? Is not the building itself proof that a builder built it? Is this not logical? It's simple. And I enjoy how Ray keeps it simple. A creation requires a creator. The universe is rational, it's orderly and it's extremely complex. And I’m called narrow-minded because I choose to follow where the evidence leads, and it doesn't lead to the universe coming about by random chances. There is intelligence involved.

I do like however in the last video where Ray tells thunderfoot "lets go get some lunch, Im paying"

Joe